STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0945SAF domain protein. (440 aa)    
Predicted Functional Partners:
RMCC_0944
PTS system glucitol/sorbitol-specific IIA compon ent.
 
    0.937
RMCC_0943
Sorbitol phosphotransferase protein II domain-containing protein.
 
    0.933
gutA
Glucitol/sorbitol-specific PTS system component IIC.
 
    0.922
RMCC_0942
PTS system protein.
 
    0.913
RMCC_0939
Uncharacterized protein.
 
     0.820
RMCC_0946
Pyruvate dehydrogenase.
 
     0.737
RMCC_0951
4-diphosphocytidyl-2C-methyl-D-erythritol syntha se.
    
 0.712
RMCC_0947
Pyruvate dehydrogenase E1 component beta subunit.
       0.688
asd
Aspartate-semialdehyde dehydrogenase; Catalyzes the NADPH-dependent formation of L-aspartate- semialdehyde (L-ASA) by the reductive dephosphorylation of L-aspartyl- 4-phosphate; Belongs to the aspartate-semialdehyde dehydrogenase family.
     
 0.678
RMCC_0948
Catalytic domain of components of various dehydr ogenase complexes.
       0.676
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.