Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_0971Cutinase. (218 aa)    
Predicted Functional Partners:
RMCC_0970
Uncharacterized protein.
       0.547
RMCC_4847
Low-density liporeceptor YWTD repeat protein.
  
     0.531
RMCC_4922
Uncharacterized protein.
  
     0.513
RMCC_3103
Lysophospholipase.
  
     0.478
RMCC_5135
Uncharacterized protein.
  
     0.468
RMCC_4414
Uncharacterized protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.427
RMCC_0972
Uncharacterized protein.
       0.412
RMCC_5137
TolA domain protein.
  
     0.405
RMCC_5948
Uncharacterized protein; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.404
RMCC_6647
Isoflavone reductase.
  
     0.401
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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