Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| RMCC_0999 | dnaJ | RMCC_0999 | RMCC_1000 | 16S ribosomal RNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Chaperone dnaJ2; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.909 |
| RMCC_0999 | hrcA | RMCC_0999 | RMCC_1001 | 16S ribosomal RNA methyltransferase RsmE; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Heat shock protein transcriptional repressor hrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.728 |
| RMCC_1806 | RMCC_3292 | RMCC_1806 | RMCC_3292 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | Molecular chaperone. | 0.947 |
| RMCC_1806 | RMCC_4050 | RMCC_1806 | RMCC_4050 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | Molecular chaperone. | 0.948 |
| RMCC_1806 | RMCC_4222 | RMCC_1806 | RMCC_4222 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | Type VII secretion-associated protein, Rv3446c f amily, C-terminal domain protein. | 0.939 |
| RMCC_1806 | RMCC_4876 | RMCC_1806 | RMCC_4876 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | Molecular chaperone. | 0.947 |
| RMCC_1806 | dnaJ | RMCC_1806 | RMCC_1000 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | Chaperone dnaJ2; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.942 |
| RMCC_1806 | dnaK | RMCC_1806 | RMCC_4840 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | Molecular chaperone DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family. | 0.939 |
| RMCC_1806 | grpE | RMCC_1806 | RMCC_4839 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | Chaperone grpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent [...] | 0.759 |
| RMCC_3292 | RMCC_1806 | RMCC_3292 | RMCC_1806 | Molecular chaperone. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | 0.947 |
| RMCC_3292 | dnaJ | RMCC_3292 | RMCC_1000 | Molecular chaperone. | Chaperone dnaJ2; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.931 |
| RMCC_3292 | grpE | RMCC_3292 | RMCC_4839 | Molecular chaperone. | Chaperone grpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent [...] | 0.978 |
| RMCC_3292 | hrcA | RMCC_3292 | RMCC_1001 | Molecular chaperone. | Heat shock protein transcriptional repressor hrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.758 |
| RMCC_3292 | htpG | RMCC_3292 | RMCC_6034 | Molecular chaperone. | Heat shock protein 90; Molecular chaperone. Has ATPase activity. | 0.951 |
| RMCC_4050 | RMCC_1806 | RMCC_4050 | RMCC_1806 | Molecular chaperone. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | 0.948 |
| RMCC_4050 | dnaJ | RMCC_4050 | RMCC_1000 | Molecular chaperone. | Chaperone dnaJ2; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, DnaK and [...] | 0.939 |
| RMCC_4050 | grpE | RMCC_4050 | RMCC_4839 | Molecular chaperone. | Chaperone grpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent [...] | 0.978 |
| RMCC_4050 | hrcA | RMCC_4050 | RMCC_1001 | Molecular chaperone. | Heat shock protein transcriptional repressor hrcA; Negative regulator of class I heat shock genes (grpE-dnaK- dnaJ and groELS operons). Prevents heat-shock induction of these operons. | 0.758 |
| RMCC_4050 | htpG | RMCC_4050 | RMCC_6034 | Molecular chaperone. | Heat shock protein 90; Molecular chaperone. Has ATPase activity. | 0.958 |
| RMCC_4222 | RMCC_1806 | RMCC_4222 | RMCC_1806 | Type VII secretion-associated protein, Rv3446c f amily, C-terminal domain protein. | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein. | 0.939 |
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