STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_1048Ring-hydroxylating dioxygenase, large terminal subunit. (387 aa)    
Predicted Functional Partners:
RMCC_6199
Ring hydroxylating enzyme beta subunit.
  
 0.930
RMCC_1047
Glutamine synthetase, type III.
    
  0.837
RMCC_6625
Ferredoxin domain oxidoreductase.
 
 
 0.763
RMCC_1046
Creatininase.
       0.762
RMCC_3929
Ferredoxin.
 
 
 0.729
RMCC_5256
Ferredoxin-like protein.
 
 
 0.728
RMCC_1049
Uncharacterized protein; Belongs to the purine-cytosine permease (2.A.39) family.
       0.727
RMCC_4832
Monooxygenase; Belongs to the globin family.
  
 
 0.704
RMCC_2831
Short chain dehydrogenase.
    
 0.694
RMCC_5208
Flavodoxin reductase family protein.
 
 
 0.684
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.