STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_1084Transmembrane nitrile hydratase. (123 aa)    
Predicted Functional Partners:
RMCC_1085
Nitrile hydratase subunit alpha.
    
 0.893
RMCC_1086
Nitrile hydratase; NHase catalyzes the hydration of various nitrile compounds to the corresponding amides; Belongs to the nitrile hydratase subunit beta family.
    
 0.859
RMCC_1083
Uncharacterized protein.
       0.781
RMCC_5522
Nitrile hydratase, beta subunit.
    
 0.596
RMCC_1082
MarR family transcriptional regulator.
       0.551
RMCC_5521
Nitrile hydratase subunit alpha.
    
 0.548
RMCC_6351
Thiocyanate hydrolase, gamma subunit.
    
 0.548
RMCC_1089
Acetamidase/formamidase.
    
  0.513
RMCC_1087
Membrane protein.
       0.413
RMCC_1088
Uncharacterized protein.
       0.402
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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