STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_1145Thioredoxin; Belongs to the thioredoxin family. (117 aa)    
Predicted Functional Partners:
RMCC_4250
Thioredoxin reductase.
  
 0.986
RMCC_3560
Thioredoxin reductase.
 
 0.984
RMCC_0222
Type 11 methyltransferase.
  
 0.926
RMCC_3906
Thioredoxin; Belongs to the thioredoxin family.
  
  
 
0.889
RMCC_1152
Cysteine desulfurase csd; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
   
 
  0.886
RMCC_2107
Cys/Met metabolism pyridoxal-phosphate-dependent enzyme.
    
  0.886
RMCC_2513
FAD-dependent pyridine nucleotide-disulfide oxidoreductase.
  
 0.771
echA12
enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
 0.742
RMCC_1143
Macrolide ABC transporter ATP-binding protein.
 
 
   0.728
gap
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.720
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.