Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCC_1290 | RMCC_1291 | RMCC_1290 | RMCC_1291 | NADH:flavin oxidoreductase. | Uncharacterized protein. | 0.543 |
RMCC_1290 | RMCC_1293 | RMCC_1290 | RMCC_1293 | NADH:flavin oxidoreductase. | Aminotransferase. | 0.614 |
RMCC_1290 | RMCC_1294 | RMCC_1290 | RMCC_1294 | NADH:flavin oxidoreductase. | Uncharacterized protein; Belongs to the HpcH/HpaI aldolase family. | 0.523 |
RMCC_1290 | tetR | RMCC_1290 | RMCC_1292 | NADH:flavin oxidoreductase. | TetR family transcriptional regulator. | 0.548 |
RMCC_1291 | RMCC_1290 | RMCC_1291 | RMCC_1290 | Uncharacterized protein. | NADH:flavin oxidoreductase. | 0.543 |
RMCC_1291 | RMCC_1293 | RMCC_1291 | RMCC_1293 | Uncharacterized protein. | Aminotransferase. | 0.752 |
RMCC_1291 | RMCC_1294 | RMCC_1291 | RMCC_1294 | Uncharacterized protein. | Uncharacterized protein; Belongs to the HpcH/HpaI aldolase family. | 0.741 |
RMCC_1291 | tetR | RMCC_1291 | RMCC_1292 | Uncharacterized protein. | TetR family transcriptional regulator. | 0.775 |
RMCC_1293 | RMCC_1290 | RMCC_1293 | RMCC_1290 | Aminotransferase. | NADH:flavin oxidoreductase. | 0.614 |
RMCC_1293 | RMCC_1291 | RMCC_1293 | RMCC_1291 | Aminotransferase. | Uncharacterized protein. | 0.752 |
RMCC_1293 | RMCC_1294 | RMCC_1293 | RMCC_1294 | Aminotransferase. | Uncharacterized protein; Belongs to the HpcH/HpaI aldolase family. | 0.762 |
RMCC_1293 | tetR | RMCC_1293 | RMCC_1292 | Aminotransferase. | TetR family transcriptional regulator. | 0.752 |
RMCC_1294 | RMCC_1290 | RMCC_1294 | RMCC_1290 | Uncharacterized protein; Belongs to the HpcH/HpaI aldolase family. | NADH:flavin oxidoreductase. | 0.523 |
RMCC_1294 | RMCC_1291 | RMCC_1294 | RMCC_1291 | Uncharacterized protein; Belongs to the HpcH/HpaI aldolase family. | Uncharacterized protein. | 0.741 |
RMCC_1294 | RMCC_1293 | RMCC_1294 | RMCC_1293 | Uncharacterized protein; Belongs to the HpcH/HpaI aldolase family. | Aminotransferase. | 0.762 |
RMCC_1294 | tetR | RMCC_1294 | RMCC_1292 | Uncharacterized protein; Belongs to the HpcH/HpaI aldolase family. | TetR family transcriptional regulator. | 0.741 |
tetR | RMCC_1290 | RMCC_1292 | RMCC_1290 | TetR family transcriptional regulator. | NADH:flavin oxidoreductase. | 0.548 |
tetR | RMCC_1291 | RMCC_1292 | RMCC_1291 | TetR family transcriptional regulator. | Uncharacterized protein. | 0.775 |
tetR | RMCC_1293 | RMCC_1292 | RMCC_1293 | TetR family transcriptional regulator. | Aminotransferase. | 0.752 |
tetR | RMCC_1294 | RMCC_1292 | RMCC_1294 | TetR family transcriptional regulator. | Uncharacterized protein; Belongs to the HpcH/HpaI aldolase family. | 0.741 |