STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_1306Binding-protein-dependent transport system inner membrane protein. (283 aa)    
Predicted Functional Partners:
RMCC_1305
ABC-type transporter, integral membrane subunit.
 
 0.982
RMCC_1304
Extracellular solute-binding protein family 5, precursor.
 
 0.967
RMCC_3626
Oligopeptide/dipeptide ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
 0.966
RMCC_1725
Oligopeptide/dipeptide ABC transporter ATPase; Belongs to the ABC transporter superfamily.
 
 0.960
RMCC_2030
Oligopeptide/dipeptide ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.957
RMCC_3706
Oligopeptide-transport integral membrane protein ABC transporter oppB.
 
 0.954
RMCC_1579
Oligopeptide transporter ATP-binding component; Belongs to the ABC transporter superfamily.
 
 0.953
RMCC_6808
ABC transporter ATP-binding protein.
 
 0.953
RMCC_1724
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.945
RMCC_3704
Oligopeptide-transport ATP-binding protein ABC transporter oppD; Belongs to the ABC transporter superfamily.
 
 0.944
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.