Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCC_1423 | RMCC_2803 | RMCC_1423 | RMCC_2803 | Serine/threonine protein kinase. | FHA domain-containing protein. | 0.953 |
RMCC_1423 | RMCC_3011 | RMCC_1423 | RMCC_3011 | Serine/threonine protein kinase. | FHA domain-containing protein. | 0.912 |
RMCC_1423 | RMCC_3013 | RMCC_1423 | RMCC_3013 | Serine/threonine protein kinase. | Serine/threonine protein phosphatase. | 0.976 |
RMCC_1423 | RMCC_3141 | RMCC_1423 | RMCC_3141 | Serine/threonine protein kinase. | Multidrug ABC transporter ATPase. | 0.932 |
RMCC_1423 | RMCC_3872 | RMCC_1423 | RMCC_3872 | Serine/threonine protein kinase. | Transmembrane ABC transporter ATP-binding protein. | 0.932 |
RMCC_1423 | RMCC_5547 | RMCC_1423 | RMCC_5547 | Serine/threonine protein kinase. | Serine/threonine phosphatase ppp. | 0.988 |
RMCC_1423 | RMCC_5548 | RMCC_1423 | RMCC_5548 | Serine/threonine protein kinase. | FHA domain-containing protein. | 0.925 |
RMCC_1423 | RMCC_5549 | RMCC_1423 | RMCC_5549 | Serine/threonine protein kinase. | FHA domain-containing protein. | 0.923 |
RMCC_1423 | RMCC_6115 | RMCC_1423 | RMCC_6115 | Serine/threonine protein kinase. | ABC transporter, ATP-binding protein. | 0.932 |
RMCC_1423 | ribBA | RMCC_1423 | RMCC_1194 | Serine/threonine protein kinase. | Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.759 |
RMCC_2803 | RMCC_1423 | RMCC_2803 | RMCC_1423 | FHA domain-containing protein. | Serine/threonine protein kinase. | 0.953 |
RMCC_2803 | RMCC_5547 | RMCC_2803 | RMCC_5547 | FHA domain-containing protein. | Serine/threonine phosphatase ppp. | 0.690 |
RMCC_2803 | RMCC_5549 | RMCC_2803 | RMCC_5549 | FHA domain-containing protein. | FHA domain-containing protein. | 0.656 |
RMCC_2803 | ribBA | RMCC_2803 | RMCC_1194 | FHA domain-containing protein. | Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.611 |
RMCC_3011 | RMCC_1423 | RMCC_3011 | RMCC_1423 | FHA domain-containing protein. | Serine/threonine protein kinase. | 0.912 |
RMCC_3011 | RMCC_3013 | RMCC_3011 | RMCC_3013 | FHA domain-containing protein. | Serine/threonine protein phosphatase. | 0.945 |
RMCC_3011 | ribBA | RMCC_3011 | RMCC_1194 | FHA domain-containing protein. | Bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; In the C-terminal section; belongs to the GTP cyclohydrolase II family. | 0.611 |
RMCC_3013 | RMCC_1423 | RMCC_3013 | RMCC_1423 | Serine/threonine protein phosphatase. | Serine/threonine protein kinase. | 0.976 |
RMCC_3013 | RMCC_3011 | RMCC_3013 | RMCC_3011 | Serine/threonine protein phosphatase. | FHA domain-containing protein. | 0.945 |
RMCC_3013 | RMCC_3141 | RMCC_3013 | RMCC_3141 | Serine/threonine protein phosphatase. | Multidrug ABC transporter ATPase. | 0.411 |
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