Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCC_0273 | RMCC_0298 | RMCC_0273 | RMCC_0298 | Ubiquinol-cytochrome C reductase qcrC. | Transmembrane protein. | 0.648 |
RMCC_0273 | RMCC_1468 | RMCC_0273 | RMCC_1468 | Ubiquinol-cytochrome C reductase qcrC. | Beta-lactamase domain-containing protein. | 0.443 |
RMCC_0273 | RMCC_4629 | RMCC_0273 | RMCC_4629 | Ubiquinol-cytochrome C reductase qcrC. | Sugar phosphate isomerase/epimerase. | 0.458 |
RMCC_0298 | RMCC_0273 | RMCC_0298 | RMCC_0273 | Transmembrane protein. | Ubiquinol-cytochrome C reductase qcrC. | 0.648 |
RMCC_0298 | RMCC_1468 | RMCC_0298 | RMCC_1468 | Transmembrane protein. | Beta-lactamase domain-containing protein. | 0.430 |
RMCC_0531 | RMCC_1468 | RMCC_0531 | RMCC_1468 | Uncharacterized protein. | Beta-lactamase domain-containing protein. | 0.482 |
RMCC_1468 | RMCC_0273 | RMCC_1468 | RMCC_0273 | Beta-lactamase domain-containing protein. | Ubiquinol-cytochrome C reductase qcrC. | 0.443 |
RMCC_1468 | RMCC_0298 | RMCC_1468 | RMCC_0298 | Beta-lactamase domain-containing protein. | Transmembrane protein. | 0.430 |
RMCC_1468 | RMCC_0531 | RMCC_1468 | RMCC_0531 | Beta-lactamase domain-containing protein. | Uncharacterized protein. | 0.482 |
RMCC_1468 | RMCC_1469 | RMCC_1468 | RMCC_1469 | Beta-lactamase domain-containing protein. | Uncharacterized protein. | 0.620 |
RMCC_1468 | RMCC_1695 | RMCC_1468 | RMCC_1695 | Beta-lactamase domain-containing protein. | LSR2 protein. | 0.532 |
RMCC_1468 | RMCC_3212 | RMCC_1468 | RMCC_3212 | Beta-lactamase domain-containing protein. | Uncharacterized protein. | 0.489 |
RMCC_1468 | RMCC_4629 | RMCC_1468 | RMCC_4629 | Beta-lactamase domain-containing protein. | Sugar phosphate isomerase/epimerase. | 0.519 |
RMCC_1468 | RMCC_6769 | RMCC_1468 | RMCC_6769 | Beta-lactamase domain-containing protein. | PTS system D-fructose-specific IIABC component (F1P-forming), Frc family. | 0.651 |
RMCC_1468 | purQ | RMCC_1468 | RMCC_1466 | Beta-lactamase domain-containing protein. | Phosphoribosylformylglycinamidine synthase I purG; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to ass [...] | 0.631 |
RMCC_1468 | purS | RMCC_1468 | RMCC_1467 | Beta-lactamase domain-containing protein. | Phosphoribosylformylglycinamidine synthase subunit PurS; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought [...] | 0.631 |
RMCC_1469 | RMCC_1468 | RMCC_1469 | RMCC_1468 | Uncharacterized protein. | Beta-lactamase domain-containing protein. | 0.620 |
RMCC_1469 | purQ | RMCC_1469 | RMCC_1466 | Uncharacterized protein. | Phosphoribosylformylglycinamidine synthase I purG; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought to ass [...] | 0.459 |
RMCC_1469 | purS | RMCC_1469 | RMCC_1467 | Uncharacterized protein. | Phosphoribosylformylglycinamidine synthase subunit PurS; Part of the phosphoribosylformylglycinamidine synthase complex involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. The FGAM synthase complex is composed of three subunits. PurQ produces an ammonia molecule by converting glutamine to glutamate. PurL transfers the ammonia molecule to FGAR to form FGAM in an ATP- dependent manner. PurS interacts with PurQ and PurL and is thought [...] | 0.452 |
RMCC_1695 | RMCC_1468 | RMCC_1695 | RMCC_1468 | LSR2 protein. | Beta-lactamase domain-containing protein. | 0.532 |
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