STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_1480TetR family transcriptional regulator. (202 aa)    
Predicted Functional Partners:
RMCC_1479
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
       0.823
RMCC_1478
Cytochrome P450 126 cyp126.
       0.757
RMCC_2335
Transmembrane protein.
  
     0.697
RMCC_0987
Uncharacterized protein.
  
     0.683
RMCC_1481
Hypothetical protein.
       0.672
RMCC_4528
Transmembrane protein.
  
     0.660
RMCC_5114
Hypothetical protein.
  
     0.655
RMCC_3056
Lipoprotein lppL.
  
     0.605
RMCC_6326
Hypothetical protein.
  
     0.600
RMCC_1679
LpqE protein.
  
     0.588
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.