STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_1508Zn-dependent alcohol dehydrogenase. (353 aa)    
Predicted Functional Partners:
RMCC_1100
Alkane-1-monooxygenase.
     
 0.863
RMCC_6386
Alkane 1-monooxygenase.
     
 0.863
RMCC_6238
Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 
 0.862
RMCC_5706
catechol-O-methyltransferase.
     
 0.855
RMCC_5932
Alcohol dehydrogenase, class IV.
  
 0.828
RMCC_0755
Iron-containing alcohol dehydrogenase.
  
 0.785
RMCC_5515
Iron-containing alcohol dehydrogenase.
  
 0.785
RMCC_1496
Zinc-type alcohol dehydrogenase NAD dependent adhB.
  
 
0.773
RMCC_6707
Alcohol dehydrogenase.
  
 
0.773
RMCC_6737
Alcohol dehydrogenase GroES domain-containing protein.
  
 
0.773
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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