Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCC_1483 | RMCC_1557 | RMCC_1483 | RMCC_1557 | Cytochrome P450. | Cytochrome P450. | 0.910 |
RMCC_1483 | RMCC_1606 | RMCC_1483 | RMCC_1606 | Cytochrome P450. | Cytochrome P450. | 0.889 |
RMCC_1483 | RMCC_1957 | RMCC_1483 | RMCC_1957 | Cytochrome P450. | Peptide synthetase. | 0.946 |
RMCC_1483 | RMCC_2895 | RMCC_1483 | RMCC_2895 | Cytochrome P450. | Cytochrome P450. | 0.889 |
RMCC_1483 | RMCC_4344 | RMCC_1483 | RMCC_4344 | Cytochrome P450. | 3-beta hydroxysteroid dehydrogenase/isomerase. | 0.908 |
RMCC_1483 | RMCC_6174 | RMCC_1483 | RMCC_6174 | Cytochrome P450. | Cholesterol oxidase precursor choD. | 0.892 |
RMCC_1483 | RMCC_6372 | RMCC_1483 | RMCC_6372 | Cytochrome P450. | Polyketide synthase pks13. | 0.970 |
RMCC_1483 | RMCC_6601 | RMCC_1483 | RMCC_6601 | Cytochrome P450. | Beta-ketoacyl synthase. | 0.892 |
RMCC_1483 | pks5-2 | RMCC_1483 | RMCC_1121 | Cytochrome P450. | Polyketide synthase pks5. | 0.892 |
RMCC_1557 | RMCC_1483 | RMCC_1557 | RMCC_1483 | Cytochrome P450. | Cytochrome P450. | 0.910 |
RMCC_1557 | RMCC_1558 | RMCC_1557 | RMCC_1558 | Cytochrome P450. | Acetoacetate decarboxylase. | 0.908 |
RMCC_1557 | RMCC_1606 | RMCC_1557 | RMCC_1606 | Cytochrome P450. | Cytochrome P450. | 0.910 |
RMCC_1557 | RMCC_1957 | RMCC_1557 | RMCC_1957 | Cytochrome P450. | Peptide synthetase. | 0.946 |
RMCC_1557 | RMCC_2895 | RMCC_1557 | RMCC_2895 | Cytochrome P450. | Cytochrome P450. | 0.910 |
RMCC_1557 | RMCC_4344 | RMCC_1557 | RMCC_4344 | Cytochrome P450. | 3-beta hydroxysteroid dehydrogenase/isomerase. | 0.924 |
RMCC_1557 | RMCC_6174 | RMCC_1557 | RMCC_6174 | Cytochrome P450. | Cholesterol oxidase precursor choD. | 0.903 |
RMCC_1557 | RMCC_6372 | RMCC_1557 | RMCC_6372 | Cytochrome P450. | Polyketide synthase pks13. | 0.970 |
RMCC_1557 | RMCC_6601 | RMCC_1557 | RMCC_6601 | Cytochrome P450. | Beta-ketoacyl synthase. | 0.892 |
RMCC_1557 | pks5-2 | RMCC_1557 | RMCC_1121 | Cytochrome P450. | Polyketide synthase pks5. | 0.892 |
RMCC_1558 | RMCC_1557 | RMCC_1558 | RMCC_1557 | Acetoacetate decarboxylase. | Cytochrome P450. | 0.908 |
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