STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_1586Hypothetical protein. (377 aa)    
Predicted Functional Partners:
RMCC_1585
Short chain dehydrogenase.
 
  
 0.965
RMCC_1584
Sulfotransferase family protein.
 
    0.954
RMCC_1537
Putative sulfotransferase.
 
    0.779
RMCC_1566
Rieske (2Fe-2S) domain-containing protein.
 
     0.779
RMCC_0596
Possible oxidoreductase.
 
     0.775
RMCC_3293
Hypothetical protein.
  
    0.768
RMCC_1652
Oxidoreductase.
 
     0.755
RMCC_1563
Ketosteroid isomerase-like protein.
  
     0.739
RMCC_3330
Transcriptional regulator.
  
     0.728
RMCC_1650
Biphenyl-2,3-diol-1,2-dioxygenase bphC.
  
     0.709
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.