STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_1723Permease. (243 aa)    
Predicted Functional Partners:
RMCC_1728
Extracellular solute-binding protein family 5.
 
     0.879
RMCC_1720
Oxidoreductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
 
     0.815
RMCC_1727
Binding-protein-dependent transport systems inner membrane component.
 
     0.806
RMCC_1726
Binding-protein-dependent transport system inner membrane protein.
  
    0.804
RMCC_1722
IclR-family transcriptional regulator.
       0.796
RMCC_1724
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
       0.792
RMCC_1725
Oligopeptide/dipeptide ABC transporter ATPase; Belongs to the ABC transporter superfamily.
       0.788
gudD
(D)-glucarate dehydratase 1; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
       0.785
RMCC_4619
uroporphyrin-III C-methyltransferase hemD.
    
  0.576
RMCC_1729
D-isomer specific 2-hydroxyacid dehydrogenase.
    
  0.566
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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