STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_1946Putative siderophore-interacting protein. (274 aa)    
Predicted Functional Partners:
RMCC_1947
ABC-type transporter, permease components; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
 0.872
RMCC_1948
Ferric enterobactin ABC transporter, permease protein FepG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
    0.862
fepC
Ferric enterobactin transport ATP-binding protein.
 
  
 0.854
RMCC_1017
Bifunctional enzyme mbtA: salicyl-AMP ligase + salicyl-S-arcp synthetase.
 
  
 0.688
RMCC_1016
Phenyloxazoline synthase mbtB.
  
  
 0.654
RMCC_1950
ABC transporter substrate-binding protein.
 
  
 0.587
lepB
Signal peptidase I; Belongs to the peptidase S26 family.
       0.532
RMCC_1010
lysine-N-oxygenase mbtG.
  
  
 0.518
RMCC_1957
Peptide synthetase.
 
  
 0.506
RMCC_1955
ABC transporter.
 
 
  0.468
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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