Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_1971MaoC-like dehydratase. (151 aa)    
Predicted Functional Partners:
RMCC_1626
acyl-CoA dehydrogenase.
  
  0.901
RMCC_1610
Short chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  0.900
RMCC_1630
acyl-CoA dehydrogenase fadE33.
  
  0.886
RMCC_3196
NADPH quinone oxidoreductase fadB4.
 
  0.851
RMCC_6756
Quinone oxidoreductase.
  0.834
RMCC_6422
acyl-CoA dehydrogenase fadE36.
 
  0.809
pks5-2
Polyketide synthase pks5.
  
 0.803
RMCC_6601
Beta-ketoacyl synthase.
  
 0.803
RMCC_1288
3-hydroxyacyl-CoA dehydrogenase.
  
 0.778
RMCC_3165
Aminoglycoside phosphotransferase.
 
  0.766
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.