Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_1998Transcriptional regulatory protein. (203 aa)    
Predicted Functional Partners:
dinB2
DNA-directed DNA polymerase; Belongs to the DNA polymerase type-Y family.
     
 0.900
RMCC_1999
NADPH-dependent FMN reductase.
 
     0.862
RMCC_4264
Transcriptional regulator.
  
    0.849
RMCC_4395
DNA-binding transcriptional activator.
  
    0.832
RMCC_3186
TetR family transcriptional regulator.
  
    0.827
RMCC_4877
Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
  
    0.802
RMCC_4120
Transcriptional regulator.
  
    0.801
RMCC_3995
TetR family transcriptional regulator.
  
    0.798
RMCC_1311
TetR family transcriptional regulator.
  
    0.797
RMCC_1996
Na+/H+ antiporter.
       0.781
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.