STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_2138Alkanesulfonate monooxygenase. (387 aa)    
Predicted Functional Partners:
RMCC_3266
Uncharacterized protein.
 
 
 0.982
RMCC_2137
acyl-CoA dehydrogenase.
 
 
  0.957
RMCC_3268
Sulfonate ABC transporter ATP-binding protein.
  
 
 0.931
RMCC_0660
Actinorhodin polyketide dimerase.
 
 
 0.927
RMCC_1649
Oxidoreductase.
 
 
 0.925
RMCC_1264
Alkanesulfonate monooxygenase, FMNH(2)-dependent protein.
 
  
 
0.919
RMCC_3267
ABC transporter permease.
 
 
 0.893
nirA_2
Ferredoxin-dependent nitrite/sulfite reductase NirA; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.887
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
     
 0.887
RMCC_3062
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
   
 
  0.887
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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