STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_2156Probable sulfite reductase. (520 aa)    
Predicted Functional Partners:
nirA_2
Ferredoxin-dependent nitrite/sulfite reductase NirA; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
  
 0.987
cysN
Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
 
  
 0.965
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite.
  
 
 0.949
RMCC_2985
Cobalamin biosynthesis protein cobG.
  
 0.933
RMCC_3840
Lyase.
  
 
 0.926
RMCC_4372
Cystathionine gamma-synthase.
  
 
 0.915
RMCC_1664
Thiosulfate sulfurtransferase sseB.
     
 0.910
RMCC_1445
Thiosulfate sulfurtransferase.
     
 0.905
RMCC_5977
Thiosulfate sulfurtransferase.
     
 0.905
RMCC_6248
Cytochrome P450.
 
 
  0.904
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.