STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_2167Beta-lactamase class A. (314 aa)    
Predicted Functional Partners:
RMCC_3309
Transmembrane protein.
  
     0.697
RMCC_2810
Von Willebrand factor, type A.
  
     0.691
RMCC_3568
Hypothetical protein.
  
     0.682
RMCC_2052
Uncharacterized protein.
  
     0.667
RMCC_3407
NLP/P60 protein.
 
     0.658
RMCC_5066
Esterase.
  
     0.641
RMCC_3695
Lipoprotein lprB.
 
     0.636
RMCC_6360
Erp protein.
  
     0.627
RMCC_4584
Esterase.
  
     0.623
RMCC_3532
Hypothetical protein.
  
     0.610
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.