STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fbpCABC-type spermidine/putrescine transport system, ATPase component; Part of the ABC transporter complex FbpABC involved in Fe(3+) ions import. Responsible for energy coupling to the transport system. (346 aa)    
Predicted Functional Partners:
RMCC_2177
ABC-type Fe3+ transport system, permease component.
 
 
 0.997
RMCC_2178
Extracellular solute-binding protein.
 
 0.996
RMCC_2832
Molbdenum-transport integral membrane protein ABC transporter modB; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
  
  0.854
RMCC_2175
AMP-dependent synthetase and ligase.
 
     0.850
RMCC_5374
Putative spermidine/putrescine ABC transporter, permease protein PotB.
 
 0.830
RMCC_5279
Binding-protein-dependent transport systems inner membrane component.
 
 0.829
RMCC_2500
ABC-type spermidine/putrescine transport system, permease component I.
 0.817
RMCC_2951
Spermidine/putrescine ABC transporter.
 
 0.810
RMCC_2501
Spermidine/putrescine ABC transporter permease.
 
 
 0.805
RMCC_2952
Polyamine ABC transporter integral membrane protein.
 
 
 0.799
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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