STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_2256Uncharacterized protein. (183 aa)    
Predicted Functional Partners:
RMCC_2255
Conserved alanine rich protein.
 
    0.915
RMCC_6347
Conserved membrane protein of unknown function.
  
     0.767
RMCC_3565
Hypothetical protein.
  
     0.752
rimP
Ribosome maturation protein RimP; Required for maturation of 30S ribosomal subunits. Belongs to the RimP family.
       0.747
RMCC_3532
Hypothetical protein.
  
     0.692
RMCC_3514
Protein of unknown function.
  
     0.691
RMCC_4050
Molecular chaperone.
  
     0.677
RMCC_2324
Alanine rich transferase.
  
     0.659
RMCC_0296
Lipoprotein lppM.
  
     0.658
nusA
Transcription elongation factor NusA; Participates in both transcription termination and antitermination.
       0.648
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.