STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_22774'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily. (219 aa)    
Predicted Functional Partners:
RMCC_2276
Metallophosphoesterase.
 
  
 0.965
RMCC_1016
Phenyloxazoline synthase mbtB.
  
 
 0.962
RMCC_1957
Peptide synthetase.
  
 
 0.948
RMCC_6372
Polyketide synthase pks13.
 
 
 0.943
RMCC_1017
Bifunctional enzyme mbtA: salicyl-AMP ligase + salicyl-S-arcp synthetase.
  
 
 0.917
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil-55 in the psi GC loop of transfer RNAs; Belongs to the pseudouridine synthase TruB family. Type 1 subfamily.
  
    0.895
RMCC_1013
Polyketide synthetase mbtD.
 
 
 0.841
RMCC_6601
Beta-ketoacyl synthase.
 
 
 0.837
pks5-2
Polyketide synthase pks5.
 
 
 0.821
acpS
4'-phosphopantetheinyl transferase; Transfers the 4'-phosphopantetheine moiety from coenzyme A to a Ser of acyl-carrier-protein; Belongs to the P-Pant transferase superfamily. AcpS family.
     
 0.783
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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