Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCC_2279 | RMCC_2379 | Uncharacterized protein. | Alpha/beta hydrolase family protein. | 0.612 |
RMCC_2279 | RMCC_3377 | Uncharacterized protein. | Hypothetical protein. | 0.551 |
RMCC_2279 | RMCC_4075 | Uncharacterized protein. | MerR family transcriptional regulator. | 0.480 |
RMCC_2279 | RMCC_4138 | Uncharacterized protein. | Protein of unknown function. | 0.581 |
RMCC_2279 | RMCC_4325 | Uncharacterized protein. | Thioesterase. | 0.490 |
RMCC_2279 | RMCC_4583 | Uncharacterized protein. | Deazaflavin-dependent nitroreductase family protein. | 0.502 |
RMCC_2279 | RMCC_4823 | Uncharacterized protein. | Secreted protein. | 0.527 |
RMCC_2279 | RMCC_5667 | Uncharacterized protein. | Uncharacterized protein. | 0.503 |
RMCC_2279 | RMCC_5981 | Uncharacterized protein. | Uncharacterized protein. | 0.504 |
RMCC_2279 | RMCC_6026 | Uncharacterized protein. | Aldehyde oxidase and xanthine dehydrogenase. | 0.547 |
RMCC_2379 | RMCC_2279 | Alpha/beta hydrolase family protein. | Uncharacterized protein. | 0.612 |
RMCC_2379 | RMCC_3377 | Alpha/beta hydrolase family protein. | Hypothetical protein. | 0.763 |
RMCC_2379 | RMCC_4823 | Alpha/beta hydrolase family protein. | Secreted protein. | 0.510 |
RMCC_3377 | RMCC_2279 | Hypothetical protein. | Uncharacterized protein. | 0.551 |
RMCC_3377 | RMCC_2379 | Hypothetical protein. | Alpha/beta hydrolase family protein. | 0.763 |
RMCC_3377 | RMCC_4823 | Hypothetical protein. | Secreted protein. | 0.735 |
RMCC_3377 | RMCC_5667 | Hypothetical protein. | Uncharacterized protein. | 0.656 |
RMCC_4075 | RMCC_2279 | MerR family transcriptional regulator. | Uncharacterized protein. | 0.480 |
RMCC_4138 | RMCC_2279 | Protein of unknown function. | Uncharacterized protein. | 0.581 |
RMCC_4138 | RMCC_4823 | Protein of unknown function. | Secreted protein. | 0.601 |
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