STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_2347Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (760 aa)    
Predicted Functional Partners:
RMCC_2935
FAD dependent oxidoreductase.
  
 0.817
RMCC_0273
Ubiquinol-cytochrome C reductase qcrC.
  
 0.811
gltB
Glutamate synthase (NADPH/NADH) large chain.
  
 0.807
RMCC_6293
Ferredoxin-dependent glutamate synthase [NADPH] large subunit gltB.
  
 0.807
RMCC_0272
Rieske iron-sulfur protein qcrA.
  
 0.796
RMCC_3883
Oxidoreductase subunit alpha.
  
 
 0.713
RMCC_2202
Translation elongation factor-like GTPase.
   
 
 0.699
tuf
Elongation factor Tu; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.699
RMCC_3063
Membrane nitrite extrusion protein narK3.
    
 0.651
RMCC_4710
Cation antiporter NADH dehydrogenase subunit.
    
 0.629
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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