STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_2437Phage prohead protease. (307 aa)    
Predicted Functional Partners:
RMCC_2436
Phage major capsid protein, HK97.
 
  
 0.927
RMCC_2438
Uncharacterized protein.
 
   
 0.827
RMCC_2440
Gp2.
       0.782
RMCC_2439
Putative GTPase.
       0.773
RMCC_2441
Gp1.
       0.773
RMCC_2433
Uncharacterized protein.
       0.573
RMCC_2434
Uncharacterized protein.
       0.571
RMCC_2429
Uncharacterized protein.
       0.558
RMCC_2430
Uncharacterized protein.
       0.558
RMCC_2431
Gp15 protein.
       0.558
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.