Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCC_2458 | RMCC_2460 | RMCC_2458 | RMCC_2460 | Gp61. | Uncharacterized protein. | 0.782 |
RMCC_2458 | RMCC_2461 | RMCC_2458 | RMCC_2461 | Gp61. | Gp30. | 0.414 |
RMCC_2458 | RMCC_2462 | RMCC_2458 | RMCC_2462 | Gp61. | HNH endonuclease. | 0.401 |
RMCC_2458 | RMCC_2463 | RMCC_2458 | RMCC_2463 | Gp61. | Uncharacterized protein. | 0.401 |
RMCC_2460 | RMCC_2458 | RMCC_2460 | RMCC_2458 | Uncharacterized protein. | Gp61. | 0.782 |
RMCC_2460 | RMCC_2462 | RMCC_2460 | RMCC_2462 | Uncharacterized protein. | HNH endonuclease. | 0.403 |
RMCC_2460 | RMCC_2463 | RMCC_2460 | RMCC_2463 | Uncharacterized protein. | Uncharacterized protein. | 0.403 |
RMCC_2461 | RMCC_2458 | RMCC_2461 | RMCC_2458 | Gp30. | Gp61. | 0.414 |
RMCC_2461 | RMCC_2462 | RMCC_2461 | RMCC_2462 | Gp30. | HNH endonuclease. | 0.778 |
RMCC_2461 | RMCC_2463 | RMCC_2461 | RMCC_2463 | Gp30. | Uncharacterized protein. | 0.778 |
RMCC_2461 | RMCC_2464 | RMCC_2461 | RMCC_2464 | Gp30. | Gp97. | 0.501 |
RMCC_2462 | RMCC_2458 | RMCC_2462 | RMCC_2458 | HNH endonuclease. | Gp61. | 0.401 |
RMCC_2462 | RMCC_2460 | RMCC_2462 | RMCC_2460 | HNH endonuclease. | Uncharacterized protein. | 0.403 |
RMCC_2462 | RMCC_2461 | RMCC_2462 | RMCC_2461 | HNH endonuclease. | Gp30. | 0.778 |
RMCC_2462 | RMCC_2463 | RMCC_2462 | RMCC_2463 | HNH endonuclease. | Uncharacterized protein. | 0.773 |
RMCC_2462 | RMCC_2464 | RMCC_2462 | RMCC_2464 | HNH endonuclease. | Gp97. | 0.501 |
RMCC_2462 | RMCC_3046 | RMCC_2462 | RMCC_3046 | HNH endonuclease. | Methionine synthase; Catalyzes the transfer of a methyl group from methyl- cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Subsequently, remethylates the cofactor using methyltetrahydrofolate. | 0.517 |
RMCC_2462 | cysN | RMCC_2462 | RMCC_3719 | HNH endonuclease. | Bifunctional sulfate adenylyltransferase subunit 1/adenylylsulfate kinase protein; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily. | 0.449 |
RMCC_2463 | RMCC_2458 | RMCC_2463 | RMCC_2458 | Uncharacterized protein. | Gp61. | 0.401 |
RMCC_2463 | RMCC_2460 | RMCC_2463 | RMCC_2460 | Uncharacterized protein. | Uncharacterized protein. | 0.403 |
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