STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_25256-phospho-beta-glucosidase. (458 aa)    
Predicted Functional Partners:
RMCC_1911
PTS system sugar phosphotransferase component IIA.
 
  
 0.905
RMCC_3951
Alpha-glucosidase aglA.
     
 0.862
RMCC_2527
Carbohydrate kinase; Belongs to the carbohydrate kinase PfkB family.
 
     0.860
RMCC_2372
Polyphosphate glucokinase ppgK.
    
 0.856
RMCC_2212
Glycoside hydrolase family 3 domain protein; Belongs to the glycosyl hydrolase 3 family.
     
 0.855
RMCC_2526
Operon regulator, DeoR family.
 
    0.817
RMCC_2528
Sugar ABC transporter substrate-binding protein.
 
     0.807
RMCC_2524
Glucosamine-6-phosphate deaminase.
       0.780
RMCC_1910
PTS system, glucose-like IIB component.
 
 
 0.680
RMCC_5938
TobH protein.
  
 
 0.675
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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