Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCC_2547 | RMCC_2548 | Transcriptional regulator, AsnC family. | Uncharacterized protein. | 0.502 |
RMCC_2547 | RMCC_2549 | Transcriptional regulator, AsnC family. | Amino acid ABC transporter permease protein. | 0.522 |
RMCC_2547 | RMCC_2550 | Transcriptional regulator, AsnC family. | ABC transporter. | 0.498 |
RMCC_2547 | RMCC_2551 | Transcriptional regulator, AsnC family. | 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.619 |
RMCC_2547 | RMCC_2552 | Transcriptional regulator, AsnC family. | Uncharacterized protein. | 0.682 |
RMCC_2547 | RMCC_2553 | Transcriptional regulator, AsnC family. | Uncharacterized protein. | 0.541 |
RMCC_2547 | RMCC_2554 | Transcriptional regulator, AsnC family. | Aldolase II superfamily protein. | 0.505 |
RMCC_2548 | RMCC_2547 | Uncharacterized protein. | Transcriptional regulator, AsnC family. | 0.502 |
RMCC_2548 | RMCC_2549 | Uncharacterized protein. | Amino acid ABC transporter permease protein. | 0.994 |
RMCC_2548 | RMCC_2550 | Uncharacterized protein. | ABC transporter. | 0.996 |
RMCC_2548 | RMCC_2551 | Uncharacterized protein. | 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.803 |
RMCC_2548 | RMCC_2552 | Uncharacterized protein. | Uncharacterized protein. | 0.831 |
RMCC_2548 | RMCC_2553 | Uncharacterized protein. | Uncharacterized protein. | 0.755 |
RMCC_2548 | RMCC_2554 | Uncharacterized protein. | Aldolase II superfamily protein. | 0.731 |
RMCC_2548 | RMCC_6769 | Uncharacterized protein. | PTS system D-fructose-specific IIABC component (F1P-forming), Frc family. | 0.505 |
RMCC_2549 | RMCC_2547 | Amino acid ABC transporter permease protein. | Transcriptional regulator, AsnC family. | 0.522 |
RMCC_2549 | RMCC_2548 | Amino acid ABC transporter permease protein. | Uncharacterized protein. | 0.994 |
RMCC_2549 | RMCC_2550 | Amino acid ABC transporter permease protein. | ABC transporter. | 0.998 |
RMCC_2549 | RMCC_2551 | Amino acid ABC transporter permease protein. | 2-hydroxyacid dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. | 0.823 |
RMCC_2549 | RMCC_2552 | Amino acid ABC transporter permease protein. | Uncharacterized protein. | 0.815 |
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