STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eccCaType VII secretion protein EccCa. (1424 aa)    
Predicted Functional Partners:
RMCC_3749
Type VII secretion integral membrane protein Ecc D.
 
 
 
 0.981
RMCC_2706
Type VII secretion protein EccB.
 
 
 0.964
RMCC_3316
Type VII secretion protein EccB, Actinobacterial.
 
 
 0.961
RMCC_4934
ESX-4 secretion system protein EccD4.
 
 
 
 0.961
RMCC_3309
Transmembrane protein.
 
 
 0.946
RMCC_3747
Type VII secretion protein EccE.
  
 
 
 0.927
RMCC_4221
Esat-6 like protein esxU; Belongs to the WXG100 family.
   
 
 0.880
RMCC_0013
WXG100 family type VII secretion target; Belongs to the WXG100 family.
   
 
 0.876
RMCC_3748
Type VII secretion-associated serine protease mycosin.
 
 
 0.876
RMCC_3307
Membrane protein.
   
 
 0.865
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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