Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCC_2367 | RMCC_2877 | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein. | Limonene-1,2-epoxide hydrolase. | 0.464 |
RMCC_2875 | RMCC_2876 | Integral membrane protein. | Soluble secreted antigen mpt53 precursor. | 0.928 |
RMCC_2875 | RMCC_2877 | Integral membrane protein. | Limonene-1,2-epoxide hydrolase. | 0.655 |
RMCC_2875 | RMCC_2878 | Integral membrane protein. | N-acyl-D-aspartate/D-glutamate deacylase. | 0.625 |
RMCC_2875 | RMCC_2879 | Integral membrane protein. | Dehydrogenase. | 0.460 |
RMCC_2875 | RMCC_2880 | Integral membrane protein. | Dienelactone hydrolase. | 0.446 |
RMCC_2876 | RMCC_2875 | Soluble secreted antigen mpt53 precursor. | Integral membrane protein. | 0.928 |
RMCC_2876 | RMCC_2877 | Soluble secreted antigen mpt53 precursor. | Limonene-1,2-epoxide hydrolase. | 0.655 |
RMCC_2876 | RMCC_2878 | Soluble secreted antigen mpt53 precursor. | N-acyl-D-aspartate/D-glutamate deacylase. | 0.625 |
RMCC_2876 | RMCC_2879 | Soluble secreted antigen mpt53 precursor. | Dehydrogenase. | 0.460 |
RMCC_2877 | RMCC_2367 | Limonene-1,2-epoxide hydrolase. | Dehydrogenase of unknown specificity, short-chain alcohol dehydrogenase like protein. | 0.464 |
RMCC_2877 | RMCC_2875 | Limonene-1,2-epoxide hydrolase. | Integral membrane protein. | 0.655 |
RMCC_2877 | RMCC_2876 | Limonene-1,2-epoxide hydrolase. | Soluble secreted antigen mpt53 precursor. | 0.655 |
RMCC_2877 | RMCC_2878 | Limonene-1,2-epoxide hydrolase. | N-acyl-D-aspartate/D-glutamate deacylase. | 0.768 |
RMCC_2877 | RMCC_2879 | Limonene-1,2-epoxide hydrolase. | Dehydrogenase. | 0.795 |
RMCC_2877 | RMCC_2880 | Limonene-1,2-epoxide hydrolase. | Dienelactone hydrolase. | 0.456 |
RMCC_2878 | RMCC_2875 | N-acyl-D-aspartate/D-glutamate deacylase. | Integral membrane protein. | 0.625 |
RMCC_2878 | RMCC_2876 | N-acyl-D-aspartate/D-glutamate deacylase. | Soluble secreted antigen mpt53 precursor. | 0.625 |
RMCC_2878 | RMCC_2877 | N-acyl-D-aspartate/D-glutamate deacylase. | Limonene-1,2-epoxide hydrolase. | 0.768 |
RMCC_2878 | RMCC_2879 | N-acyl-D-aspartate/D-glutamate deacylase. | Dehydrogenase. | 0.561 |
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