Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_2995Lactoylglutathione lyase-like lyase. (131 aa)    
Predicted Functional Partners:
RMCC_2994
Dipeptidase pepE; Belongs to the peptidase M24B family.
       0.782
RMCC_1124
methylmalonyl-CoA mutase.
    
 0.651
RMCC_1125
methylmalonyl-CoA mutase small subunit mutA.
    
 0.651
RMCC_2996
5'-3' exonuclease.
       0.575
pks5-2
Polyketide synthase pks5.
 
 0.569
RMCC_3883
Oxidoreductase subunit alpha.
     
 0.548
RMCC_6601
Beta-ketoacyl synthase.
  
 0.508
RMCC_4784
Rhodanese-related sulfurtransferase.
  
 
  0.489
RMCC_0120
Zn-dependent hydrolase.
   
  0.487
RMCC_3908
Beta-lactamase domain-containing protein.
   
  0.487
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.