STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_3034Uncharacterized protein. (265 aa)    
Predicted Functional Partners:
RMCC_3033
Recombinase B.
       0.801
RMCC_3035
ArsR family transcriptional regulator.
 
     0.665
RMCC_1288
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.622
RMCC_3036
Activator of Hsp90 ATPase 1 family protein.
       0.614
RMCC_3037
Multimeric flavodoxin WrbA.
       0.610
RMCC_3032
tRNA (adenine-N(1)-)-methyltransferase; Catalyzes the S-adenosyl-L-methionine-dependent formation of N(1)-methyladenine at position 58 (m1A58) in tRNA.
       0.575
RMCC_5699
Integral membrane protein.
  
     0.564
RMCC_3991
Oxidase regulatory-like protein.
 
 
  0.463
RMCC_4482
enoyl-CoA hydratase.
  
 
  0.435
RMCC_3350
Regulatory protein LuxR.
  
     0.434
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (14%) [HD]