STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_3071ABC transporter-like protein. (242 aa)    
Predicted Functional Partners:
hisM
ABC-type amino acid transport system, permease protein.
  0.993
RMCC_2549
Amino acid ABC transporter permease protein.
 0.991
RMCC_3073
Polar amino acid ABC transporter, inner membrane subunit.
  0.989
RMCC_2548
Uncharacterized protein.
 
 0.985
RMCC_4428
Glutamine ABC transporter permease.
 0.984
RMCC_3074
Uncharacterized protein.
 
 0.977
RMCC_4537
Truncated polar amino acid ABC transporter.
  0.973
RMCC_2330
Amino acid ABC transporter membrane protein 2, PAAT family.
 
 0.969
RMCC_2331
Amino acid ABC transporter membrane protein 1, PAAT family.
 
 0.969
RMCC_0339
Truncated polar amino acid ABC transporter.
  0.958
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.