STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_3121Maltooligosyltrehalose trehalohydrolase treZ. (571 aa)    
Predicted Functional Partners:
RMCC_3120
Maltooligosyltrehalose synthase treY.
 
0.999
RMCC_3119
Maltooligosyltrehalose synthase treX; Belongs to the glycosyl hydrolase 13 family.
 
 0.997
glgE
Glucanase glgE; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB.
 
 
 0.982
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
 
 
 0.982
RMCC_3784
Glycogen operon protein GlgX; Belongs to the glycosyl hydrolase 13 family.
 
 0.976
RMCC_4496
Uncharacterized protein.
 
 0.971
RMCC_1658
HAD superfamily hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
 0.968
RMCC_5347
Glycosyltransferase.
  
 0.964
RMCC_1033
Glycoside hydrolase 15-related protein.
 
 
 0.957
RMCC_0558
Trehalose-6-phosphate phosphatase otsB1.
 
 
 0.932
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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