Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCC_1254 | RMCC_1288 | RMCC_1254 | RMCC_1288 | enoyl-CoA hydratase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.935 |
RMCC_1254 | RMCC_2049 | RMCC_1254 | RMCC_2049 | enoyl-CoA hydratase. | enoyl-CoA hydratase. | 0.574 |
RMCC_1254 | RMCC_2272 | RMCC_1254 | RMCC_2272 | enoyl-CoA hydratase. | enoyl-CoA hydratase. | 0.539 |
RMCC_1254 | RMCC_2839 | RMCC_1254 | RMCC_2839 | enoyl-CoA hydratase. | acetyl-CoA acetyltransferase. | 0.659 |
RMCC_1254 | RMCC_3164 | RMCC_1254 | RMCC_3164 | enoyl-CoA hydratase. | acyl-CoA dehydrogenase. | 0.916 |
RMCC_1254 | RMCC_3165 | RMCC_1254 | RMCC_3165 | enoyl-CoA hydratase. | Aminoglycoside phosphotransferase. | 0.451 |
RMCC_1254 | echA12 | RMCC_1254 | RMCC_1144 | enoyl-CoA hydratase. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.731 |
RMCC_1288 | RMCC_1254 | RMCC_1288 | RMCC_1254 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase. | 0.935 |
RMCC_1288 | RMCC_1551 | RMCC_1288 | RMCC_1551 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase. | 0.917 |
RMCC_1288 | RMCC_1612 | RMCC_1288 | RMCC_1612 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase. | 0.933 |
RMCC_1288 | RMCC_2049 | RMCC_1288 | RMCC_2049 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase. | 0.918 |
RMCC_1288 | RMCC_2272 | RMCC_1288 | RMCC_2272 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase. | 0.913 |
RMCC_1288 | RMCC_2839 | RMCC_1288 | RMCC_2839 | 3-hydroxyacyl-CoA dehydrogenase. | acetyl-CoA acetyltransferase. | 0.996 |
RMCC_1288 | RMCC_3164 | RMCC_1288 | RMCC_3164 | 3-hydroxyacyl-CoA dehydrogenase. | acyl-CoA dehydrogenase. | 0.963 |
RMCC_1288 | RMCC_3165 | RMCC_1288 | RMCC_3165 | 3-hydroxyacyl-CoA dehydrogenase. | Aminoglycoside phosphotransferase. | 0.681 |
RMCC_1288 | RMCC_5575 | RMCC_1288 | RMCC_5575 | 3-hydroxyacyl-CoA dehydrogenase. | acetyl-CoA acetyltransferase. | 0.912 |
RMCC_1288 | echA12 | RMCC_1288 | RMCC_1144 | 3-hydroxyacyl-CoA dehydrogenase. | enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.915 |
RMCC_1551 | RMCC_1288 | RMCC_1551 | RMCC_1288 | enoyl-CoA hydratase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.917 |
RMCC_1551 | RMCC_2272 | RMCC_1551 | RMCC_2272 | enoyl-CoA hydratase. | enoyl-CoA hydratase. | 0.484 |
RMCC_1551 | RMCC_2839 | RMCC_1551 | RMCC_2839 | enoyl-CoA hydratase. | acetyl-CoA acetyltransferase. | 0.711 |
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