STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_3203Binding-protein-dependent transport systems inner membrane component. (271 aa)    
Predicted Functional Partners:
RMCC_3202
ABC transporter--like protein; Belongs to the ABC transporter superfamily.
 
 0.998
RMCC_3205
Extracellular solute-binding protein.
 
 0.997
RMCC_3204
Binding-protein-dependent transport systems inner membrane component.
 0.996
RMCC_5368
Lipoprotein (sugar-binding) lpqY.
 
 0.996
RMCC_2531
ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 0.993
RMCC_5371
Sugar-transport ATP-binding protein ABC transporter sugC; Belongs to the ABC transporter superfamily.
 
 0.993
ugpC
Sugar ABC transporter ATP-binding protein; Part of the ABC transporter complex UgpABCE involved in sn- glycerol-3-phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. sn-glycerol-3- phosphate importer (TC 3.A.1.1.3) family.
 
 0.993
RMCC_5369
Sugar-transport integral membrane protein ABC transporter sugA.
 0.986
RMCC_0958
Sugar-transport integral membrane protein ABC transporter uspA.
 0.984
RMCC_6102
Sugar ABC transporter integral membrane protein.
 0.983
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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