STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_3207Transcriptional regulator of sugar metabolism. (261 aa)    
Predicted Functional Partners:
RMCC_6769
PTS system D-fructose-specific IIABC component (F1P-forming), Frc family.
 
  
 0.854
RMCC_3206
Carbohydrate kinase; Belongs to the FGGY kinase family.
  
  
 0.799
RMCC_6768
Ribokinase-like domain-containing protein; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.757
RMCC_3205
Extracellular solute-binding protein.
       0.712
RMCC_0575
6-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family.
 
  
 0.697
nadK
Inorganic polyphosphate/ATP-NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
   
 
  0.611
RMCC_3203
Binding-protein-dependent transport systems inner membrane component.
     
 0.570
RMCC_3204
Binding-protein-dependent transport systems inner membrane component.
       0.568
RMCC_3201
Short-chain dehydrogenase/reductase SDR.
  
    0.556
RMCC_3202
ABC transporter--like protein; Belongs to the ABC transporter superfamily.
  
    0.532
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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