Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
RMCC_3232ErfK/YbiS/YcfS/YnhG family protein. (406 aa)    
Predicted Functional Partners:
RMCC_3842
Membrane carboxypeptidase.
  
  
 0.700
RMCC_1715
D-alanyl-D-alanine carboxypeptidase.
  
  
 0.693
RMCC_3558
Hydrolase.
 
  
 0.690
RMCC_3526
Penicillin-binding protein pbpA.
     
 0.632
RMCC_1447
Protein of unknown function; May play a role in the intracellular transport of hydrophobic ligands.
  
     0.569
RMCC_5587
Chorismate mutase.
  
     0.554
RMCC_3234
Uncharacterized protein.
    
  0.540
RMCC_2067
Methionine synthase, vitamin-B12 independent.
  
     0.536
RMCC_5284
Chorismate mutase.
  
     0.530
RMCC_3233
DSBA oxidoreductase.
       0.521
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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