Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RMCC_0482 | RMCC_2138 | RMCC_0482 | RMCC_2138 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | Alkanesulfonate monooxygenase. | 0.468 |
RMCC_0482 | RMCC_3266 | RMCC_0482 | RMCC_3266 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | Uncharacterized protein. | 0.856 |
RMCC_0482 | RMCC_3267 | RMCC_0482 | RMCC_3267 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | ABC transporter permease. | 0.887 |
RMCC_0482 | RMCC_3268 | RMCC_0482 | RMCC_3268 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | Sulfonate ABC transporter ATP-binding protein. | 0.828 |
RMCC_0482 | RMCC_3269 | RMCC_0482 | RMCC_3269 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | Alkanesulfonate monooxygenase. | 0.468 |
RMCC_0482 | RMCC_4551 | RMCC_0482 | RMCC_4551 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | ABC transporter ATP-binding protein. | 0.922 |
RMCC_0482 | RMCC_5264 | RMCC_0482 | RMCC_5264 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | Binding-protein-dependent transporters inner membrane component. | 0.751 |
RMCC_0482 | RMCC_5265 | RMCC_0482 | RMCC_5265 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | Putative ABC transporter substrate binding prote in. | 0.689 |
RMCC_0482 | RMCC_5266 | RMCC_0482 | RMCC_5266 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | ABC transporter. | 0.849 |
RMCC_0482 | ssuB | RMCC_0482 | RMCC_0483 | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | Nitrate/sulfonate/bicarbonate ABC transporter ATPase. | 0.987 |
RMCC_2138 | RMCC_0482 | RMCC_2138 | RMCC_0482 | Alkanesulfonate monooxygenase. | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | 0.468 |
RMCC_2138 | RMCC_3266 | RMCC_2138 | RMCC_3266 | Alkanesulfonate monooxygenase. | Uncharacterized protein. | 0.982 |
RMCC_2138 | RMCC_3267 | RMCC_2138 | RMCC_3267 | Alkanesulfonate monooxygenase. | ABC transporter permease. | 0.893 |
RMCC_2138 | RMCC_3268 | RMCC_2138 | RMCC_3268 | Alkanesulfonate monooxygenase. | Sulfonate ABC transporter ATP-binding protein. | 0.931 |
RMCC_2138 | RMCC_4551 | RMCC_2138 | RMCC_4551 | Alkanesulfonate monooxygenase. | ABC transporter ATP-binding protein. | 0.698 |
RMCC_2138 | RMCC_5264 | RMCC_2138 | RMCC_5264 | Alkanesulfonate monooxygenase. | Binding-protein-dependent transporters inner membrane component. | 0.609 |
RMCC_2138 | RMCC_5265 | RMCC_2138 | RMCC_5265 | Alkanesulfonate monooxygenase. | Putative ABC transporter substrate binding prote in. | 0.668 |
RMCC_2138 | RMCC_5266 | RMCC_2138 | RMCC_5266 | Alkanesulfonate monooxygenase. | ABC transporter. | 0.698 |
RMCC_2138 | ssuB | RMCC_2138 | RMCC_0483 | Alkanesulfonate monooxygenase. | Nitrate/sulfonate/bicarbonate ABC transporter ATPase. | 0.698 |
RMCC_3266 | RMCC_0482 | RMCC_3266 | RMCC_0482 | Uncharacterized protein. | ABC-type nitrate/sulfonate/bicarbonate transport system, permease component. | 0.856 |
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