STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_3313PPE family protein. (510 aa)    
Predicted Functional Partners:
RMCC_3314
PE family protein PE15.
     
 0.957
RMCC_3312
PE family protein.
  
  
 0.922
RMCC_3316
Type VII secretion protein EccB, Actinobacterial.
  
 
 0.890
RMCC_3315
Cell division protein FtsK.
  
  
 0.846
RMCC_3311
EsaT-6 like protein EsxH; Belongs to the WXG100 family.
  
  
 0.808
RMCC_3309
Transmembrane protein.
  
  
 0.785
RMCC_3307
Membrane protein.
  
  
 0.762
RMCC_3317
ATPase central domain-containing protein.
  
  
 0.761
RMCC_3310
Secretion protein EspG.
  
  
 0.759
RMCC_3308
Membrane-anchored mycosin mycP3.
  
  
 0.675
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.