STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_3314PE family protein PE15. (102 aa)    
Predicted Functional Partners:
RMCC_3313
PPE family protein.
     
 0.957
RMCC_3312
PE family protein.
     
 0.924
RMCC_3316
Type VII secretion protein EccB, Actinobacterial.
     
 0.916
RMCC_3315
Cell division protein FtsK.
       0.887
RMCC_3311
EsaT-6 like protein EsxH; Belongs to the WXG100 family.
     
 0.800
RMCC_3317
ATPase central domain-containing protein.
       0.782
RMCC_3309
Transmembrane protein.
     
 0.656
RMCC_3310
Secretion protein EspG.
     
 0.600
RMCC_3308
Membrane-anchored mycosin mycP3.
       0.531
RMCC_3307
Membrane protein.
       0.510
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.