Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCC_0546 | RMCC_3442 | Magnesium-translocating P-type ATPase. | Heavy metal translocating P-type ATPase. | 0.413 |
RMCC_3425 | RMCC_3442 | Multicopper oxidase. | Heavy metal translocating P-type ATPase. | 0.597 |
RMCC_3434 | RMCC_3442 | Heavy metal transport/detoxification protein. | Heavy metal translocating P-type ATPase. | 0.864 |
RMCC_3441 | RMCC_3442 | Uncharacterized protein. | Heavy metal translocating P-type ATPase. | 0.578 |
RMCC_3441 | RMCC_3443 | Uncharacterized protein. | Regulatory protein ArsR. | 0.582 |
RMCC_3442 | RMCC_0546 | Heavy metal translocating P-type ATPase. | Magnesium-translocating P-type ATPase. | 0.413 |
RMCC_3442 | RMCC_3425 | Heavy metal translocating P-type ATPase. | Multicopper oxidase. | 0.597 |
RMCC_3442 | RMCC_3434 | Heavy metal translocating P-type ATPase. | Heavy metal transport/detoxification protein. | 0.864 |
RMCC_3442 | RMCC_3441 | Heavy metal translocating P-type ATPase. | Uncharacterized protein. | 0.578 |
RMCC_3442 | RMCC_3443 | Heavy metal translocating P-type ATPase. | Regulatory protein ArsR. | 0.855 |
RMCC_3442 | RMCC_3445 | Heavy metal translocating P-type ATPase. | Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein. | 0.419 |
RMCC_3442 | RMCC_3688 | Heavy metal translocating P-type ATPase. | Copper ion binding protein. | 0.818 |
RMCC_3442 | RMCC_4200 | Heavy metal translocating P-type ATPase. | Heavy metal transport/detoxification protein. | 0.864 |
RMCC_3442 | RMCC_4207 | Heavy metal translocating P-type ATPase. | Multicopper oxidase. | 0.600 |
RMCC_3442 | RMCC_5383 | Heavy metal translocating P-type ATPase. | Magnesium-translocating P-type ATPase. | 0.411 |
RMCC_3443 | RMCC_3441 | Regulatory protein ArsR. | Uncharacterized protein. | 0.582 |
RMCC_3443 | RMCC_3442 | Regulatory protein ArsR. | Heavy metal translocating P-type ATPase. | 0.855 |
RMCC_3445 | RMCC_3442 | Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein. | Heavy metal translocating P-type ATPase. | 0.419 |
RMCC_3688 | RMCC_3442 | Copper ion binding protein. | Heavy metal translocating P-type ATPase. | 0.818 |
RMCC_4200 | RMCC_3442 | Heavy metal transport/detoxification protein. | Heavy metal translocating P-type ATPase. | 0.864 |
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