STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_3445Cytochrome c oxidase caa3-type, assembly factor CtaG-related protein. (641 aa)    
Predicted Functional Partners:
RMCC_3444
Transmembrane protein.
 
    0.933
RMCC_6324
Nuclear export factor GLE1 family protein.
 
  
 0.814
RMCC_6323
Copper resistance protein CopC.
 
  
 0.776
RMCC_0272
Rieske iron-sulfur protein qcrA.
 
 
  0.753
RMCC_0112
Transmembrane protein.
  
    0.724
RMCC_4595
Transmembrane protein.
  
    0.707
RMCC_3447
Copper resistance protein CopC, precursor.
 
  
 0.699
RMCC_0273
Ubiquinol-cytochrome C reductase qcrC.
 
  
 0.669
RMCC_6341
Abortive infection protein.
  
     0.607
qcrB
Ubiquinol-cytochrome c reductase cytochrome b subunit.
 
 
 0.603
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.