STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_3460Putative oxidoreductase. (244 aa)    
Predicted Functional Partners:
RMCC_3461
Molybdopterin binding domain-containing oxidoreductase.
 
  
  0.962
RMCC_3459
Uncharacterized protein.
 
     0.952
RMCC_4832
Monooxygenase; Belongs to the globin family.
 
 
 0.684
RMCC_0067
Hydroxylase for synthesis of 2-methylthio-cis-ribozeatin in tRNA.
  
 0.595
RMCC_5024
Delta-1-pyrroline-5-carboxylate dehydrogenase/L-proline dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.553
RMCC_6042
Flavodoxin oxidoreductase.
  
  
  0.531
RMCC_3462
Oxidoreductase.
       0.528
RMCC_1150
Metal-sulfur cluster biosynthetic protein.
  
 
 0.517
RMCC_3062
Molybdopterin oxidoreductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
     
 0.499
RMCC_3506
ferredoxin/ferredoxin--NADP reductase.
    
 0.494
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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