STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cwsACell wall synthesis protein CwsA; Required for regulated cell division, cell wall synthesis and the maintenance of cell shape; Belongs to the CwsA family. (108 aa)    
Predicted Functional Partners:
crgA
Septation inhibitor protein; Involved in cell division; Belongs to the CrgA family.
    
 
 0.903
RMCC_0315
DivIVA domain-containing protein.
    
 
 0.878
RMCC_6522
acyl-CoA dehydrogenase.
      
 0.713
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
      
 0.710
RMCC_1630
acyl-CoA dehydrogenase fadE33.
      
 0.675
RMCC_3533
Iron-regulated peptidyl-prolyl-cis-trans-isomerase A ppiA; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family.
       0.593
RMCC_1491
Cytochrome P450 123 cyp123.
      
 0.506
RMCC_0302
Penicillin-binding membrane protein pbpB.
      
 0.497
RMCC_3526
Penicillin-binding protein pbpA.
      
 0.493
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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