STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_3575Glutathione-independent formaldehyde dehydrogenase. (404 aa)    
Predicted Functional Partners:
RMCC_6769
PTS system D-fructose-specific IIABC component (F1P-forming), Frc family.
  
 
 0.776
RMCC_5935
Iron-containing alcohol dehydrogenase.
  
 
 0.771
bioF
8-amino-7-oxononanoate synthase.
  
 
 0.728
RMCC_1496
Zinc-type alcohol dehydrogenase NAD dependent adhB.
  
 
  0.724
RMCC_6707
Alcohol dehydrogenase.
  
 
 
0.704
RMCC_3883
Oxidoreductase subunit alpha.
    
 0.692
RMCC_6070
Alcohol dehydrogenase.
  
 
 
0.689
RMCC_0693
Alcohol dehydrogenase.
  
 
 
0.678
RMCC_1918
Dihydroxyacetone kinase subunit DhaK.
   
  0.657
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.619
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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