STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RMCC_3652Ornithine-acyl[acyl carrier protein] N-acyltrans ferase. (269 aa)    
Predicted Functional Partners:
RMCC_2064
1-acyl-sn-glycerol-3-phosphate acyltransferase.
 
  
 0.863
RMCC_3653
Putative peptide monooxygenase.
       0.801
RMCC_3651
Tetracenomycin C resistance and export protein.
       0.763
RMCC_3650
Acyltransferase 3.
       0.711
deaD
Cold-shock deaD-box protein A deaD; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation.
       0.680
RMCC_3654
FAD-binding 9, siderophore-interacting domain-containing protein.
       0.636
cdsA
Phosphatidate cytidylyltransferase; Belongs to the CDS family.
     
 0.541
RMCC_3647
Lipoprotein lprE.
       0.433
RMCC_4784
Rhodanese-related sulfurtransferase.
  
     0.416
Your Current Organism:
Mycolicibacterium canariasense
NCBI taxonomy Id: 228230
Other names: CCUG 47953, CIP 107998, DSM 44828, JCM 15298, M. canariasense, Mycobacterium canariasense, Mycobacterium canariasense Jimenez et al. 2004, Mycolicibacterium canariasense (Jimenez et al. 2004) Gupta et al. 2018, strain 502329
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