Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
RMCC_3703 | RMCC_3704 | Periplasmic oligopeptide-binding lipoprotein oppA. | Oligopeptide-transport ATP-binding protein ABC transporter oppD; Belongs to the ABC transporter superfamily. | 0.994 |
RMCC_3703 | RMCC_3705 | Periplasmic oligopeptide-binding lipoprotein oppA. | Oligopeptide-transport integral membrane protein ABC transporter oppC. | 0.997 |
RMCC_3703 | RMCC_3706 | Periplasmic oligopeptide-binding lipoprotein oppA. | Oligopeptide-transport integral membrane protein ABC transporter oppB. | 0.999 |
RMCC_3703 | RMCC_3707 | Periplasmic oligopeptide-binding lipoprotein oppA. | Uncharacterized protein. | 0.565 |
RMCC_3703 | RMCC_3708 | Periplasmic oligopeptide-binding lipoprotein oppA. | Uncharacterized protein. | 0.404 |
RMCC_3704 | RMCC_3703 | Oligopeptide-transport ATP-binding protein ABC transporter oppD; Belongs to the ABC transporter superfamily. | Periplasmic oligopeptide-binding lipoprotein oppA. | 0.994 |
RMCC_3704 | RMCC_3705 | Oligopeptide-transport ATP-binding protein ABC transporter oppD; Belongs to the ABC transporter superfamily. | Oligopeptide-transport integral membrane protein ABC transporter oppC. | 0.997 |
RMCC_3704 | RMCC_3706 | Oligopeptide-transport ATP-binding protein ABC transporter oppD; Belongs to the ABC transporter superfamily. | Oligopeptide-transport integral membrane protein ABC transporter oppB. | 0.997 |
RMCC_3704 | RMCC_3707 | Oligopeptide-transport ATP-binding protein ABC transporter oppD; Belongs to the ABC transporter superfamily. | Uncharacterized protein. | 0.565 |
RMCC_3704 | RMCC_3708 | Oligopeptide-transport ATP-binding protein ABC transporter oppD; Belongs to the ABC transporter superfamily. | Uncharacterized protein. | 0.404 |
RMCC_3705 | RMCC_3703 | Oligopeptide-transport integral membrane protein ABC transporter oppC. | Periplasmic oligopeptide-binding lipoprotein oppA. | 0.997 |
RMCC_3705 | RMCC_3704 | Oligopeptide-transport integral membrane protein ABC transporter oppC. | Oligopeptide-transport ATP-binding protein ABC transporter oppD; Belongs to the ABC transporter superfamily. | 0.997 |
RMCC_3705 | RMCC_3706 | Oligopeptide-transport integral membrane protein ABC transporter oppC. | Oligopeptide-transport integral membrane protein ABC transporter oppB. | 0.999 |
RMCC_3705 | RMCC_3707 | Oligopeptide-transport integral membrane protein ABC transporter oppC. | Uncharacterized protein. | 0.565 |
RMCC_3705 | RMCC_3708 | Oligopeptide-transport integral membrane protein ABC transporter oppC. | Uncharacterized protein. | 0.404 |
RMCC_3706 | RMCC_3703 | Oligopeptide-transport integral membrane protein ABC transporter oppB. | Periplasmic oligopeptide-binding lipoprotein oppA. | 0.999 |
RMCC_3706 | RMCC_3704 | Oligopeptide-transport integral membrane protein ABC transporter oppB. | Oligopeptide-transport ATP-binding protein ABC transporter oppD; Belongs to the ABC transporter superfamily. | 0.997 |
RMCC_3706 | RMCC_3705 | Oligopeptide-transport integral membrane protein ABC transporter oppB. | Oligopeptide-transport integral membrane protein ABC transporter oppC. | 0.999 |
RMCC_3706 | RMCC_3707 | Oligopeptide-transport integral membrane protein ABC transporter oppB. | Uncharacterized protein. | 0.565 |
RMCC_3706 | RMCC_3708 | Oligopeptide-transport integral membrane protein ABC transporter oppB. | Uncharacterized protein. | 0.404 |
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